The detailed information of tRNA gene sequence


Sequence ID>WENV170525132
Genome IDCEWH01088612
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 239
End posion on genome 164
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagtatttcT
tRNA gene sequence 
TGCGGGATAGAGCAGTTTGGTAGCTCGTCGGGCTCATAATCCGAAGGTCAATGGTTCAAA
TCCGTTTCCCGCTATta
Downstream region at tRNA end position 
gatttaaaag
Secondary structure (Cloverleaf model)
>WENV170525132	Met	CAT
                   T      ATta gatttaaaag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T T G C C     A
      T G A        A      | | + | |     A
    T       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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