The detailed information of tRNA gene sequence


Sequence ID>WENV170525215
Genome IDCEWH01096952
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1276
End posion on genome 1352
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggcgttcgtt
tRNA gene sequence 
CGGGGCATAGCTCAGCTTGGTAGAGCGCCTGGTTTGGGTCCAGGAGGTCGCATGTTCAAA
TCGTGTTGCCCCGACCA
Downstream region at tRNA end position 
tttcccgcca
Secondary structure (Cloverleaf model)
>WENV170525215	Pro	TGG
                   t      ACCA tttcccgcca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G T G C     A
      C G A        A      + | | + |     A
    T       C T C G       G C A T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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