The detailed information of tRNA gene sequence


Sequence ID>WENV170525692
Genome IDCEWH01147577
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2668
End posion on genome 2744
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaggcaccac
tRNA gene sequence 
GCACTTGTATCTCAATTGGTTAGAGAAGTCCGCTCATAACGGAAAGGTTGTAGGTTCGAG
TCCTACCAGGTGCACCA
Downstream region at tRNA end position 
cggttacgta
Secondary structure (Cloverleaf model)
>WENV170525692	Met	CAT
                   c      ACCA cggttacgta
                     G - C
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C T       G T A G G     C
    G       | | | |                 T T
    G       G A G A
      T T A        A     AGGTT
                    G   A
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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