The detailed information of tRNA gene sequence


Sequence ID>WENV170525839
Genome IDCEWH01228936
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 265
End posion on genome 339
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gacttctcac
tRNA gene sequence 
AGGAGTATGGTGTAATTGGCAACATATCGGGCTCCAACCCCGCAGATCAGGGTTCAAATC
CTTGTACTCCTGCCA
Downstream region at tRNA end position 
aaaaataaaa
Secondary structure (Cloverleaf model)
>WENV170525839	Trp	CCA
                   c      GCCA aaaaataaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     G T T C C     A
      T A A        G      | | + | |     A
    T       T G T G       C A G G G     C
    G       | | | +                 T T
    G       A C A T
      C A          A     AGAT
                    T   C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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