The detailed information of tRNA gene sequence


Sequence ID>WENV170525888
Genome IDCEWH01249825
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 431
End posion on genome 340
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgataaataa
tRNA gene sequence 
GGAGACATGACCGAGAGGCCGATGGTGCTGGATTGCTAATCCAGTGTGGGGGTCAAACTC
CACCGAGGGTTCGAATCCCTCTGTCTCCGCCA
Downstream region at tRNA end position 
ttatctcggg
Secondary structure (Cloverleaf model)
>WENV170525888	Ser	GCT
                   a      GCCA ttatctcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGGGGGTCAAACTCCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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