The detailed information of tRNA gene sequence


Sequence ID>WENV170525918
Genome IDCEWH01257028
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 360
End posion on genome 288
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgcggcacca
tRNA gene sequence 
GTTCGTATGGTCCAGTGGTTAAGACGTCTGCTTTACACGCAGAAGATCGCAGGTTCAATC
CCTGCTACGAACAtat
Downstream region at tRNA end position 
ttttaatgtt
Secondary structure (Cloverleaf model)
>WENV170525918	Val	TAC
                   a      Atat ttttaatgtt
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     T - A
                     A - T          C T
                    T     C G T C C     A
      T G A        G      | | | | |     A
    G       C C T G       G C A G G     C
    G         | | |                 T T
    T       A G A C
      T A          G     AGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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