The detailed information of tRNA gene sequence


Sequence ID>WENV170525959
Genome IDCEWH01267312
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1294
End posion on genome 1219
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnncctcT
tRNA gene sequence 
GGGGGATTAGTTTATCCGGGAAAATACAAGATTTGCAATCTTGAGTGAGGAGTTCAAGTC
TCCTATCCTCCATCA
Downstream region at tRNA end position 
aactttttga
Secondary structure (Cloverleaf model)
>WENV170525959	Ala	TGC
                   T      ATCA aactttttga
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     T C C T C     A
      C T A        A      | | | | |     A
    C       T T T G       A G G A G     C
    G       | | | +                 T T
    G       A A A T
      G A          A     AGTG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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