The detailed information of tRNA gene sequence


Sequence ID>WENV170526077
Genome IDCEWI01002769
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 433
End posion on genome 357
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgtttatcc
tRNA gene sequence 
AGGGAAGTAGTTCAGCCTGGAAGAACGCTTGGTTTGGGACCAAGAGGTCGCAGGTTCAAA
TCCTGTCTTCCCTACCA
Downstream region at tRNA end position 
gaaatttttt
Secondary structure (Cloverleaf model)
>WENV170526077	Pro	TGG
                   c      ACCA gaaatttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    C       C T T G       G C A G G     C
    T       | | | |                 T T
    G       G A A C
      G A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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