The detailed information of tRNA gene sequence


Sequence ID>WENV170526424
Genome IDCEWI01031032
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 544
End posion on genome 467
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccgcgtcgc
tRNA gene sequence 
GCTCGAGTGGTGTAGCCTGGCCTATCATCTCAGCCTGTCGAGCTGAGGACTCGGGTTCAA
ATCCCGGCTCGGGCGCCA
Downstream region at tRNA end position 
tttcgcacat
Secondary structure (Cloverleaf model)
>WENV170526424	Asp	GTC
                   c      GCCA tttcgcacat
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      + | | | |     A
  T         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        C     GGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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