The detailed information of tRNA gene sequence


Sequence ID>WENV170526648
Genome IDCEWI01053850
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 365
End posion on genome 273
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatactacat
tRNA gene sequence 
GGAGGGGTCGCATAGTCTGGCCTAGTGCGCGGCACTCGAAATGCCGTGAGTTTGAATAAA
GCTCCGTGGGTTCGAATCCCACTCCCTCCTCTA
Downstream region at tRNA end position 
taaatttatt
Secondary structure (Cloverleaf model)
>WENV170526648	Ser	CGA
                   t      TCTA taaatttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TGAGTTTGAATAAAGCTCC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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