The detailed information of tRNA gene sequence


Sequence ID>WENV170527029
Genome IDCEWI01102279
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 208
End posion on genome 299
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attcaacaat
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTGTGGGGCTCTAAAC
TCCACCGAGGGTTCGAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
aatatttgga
Secondary structure (Cloverleaf model)
>WENV170527029	Ser	GCT
                   t      GCat aatatttgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTGGGGCTCTAAACTCCACC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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