The detailed information of tRNA gene sequence


Sequence ID>WENV170527162
Genome IDCEWI01122010
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 358
End posion on genome 281
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
caatattaat
tRNA gene sequence 
GGGTCATTAACTCAGTTGGTTCAGAGTGTTACCTTGACAGGGTAGAAGTCACTGGTTCGA
ATCCAGTATGACCCACCA
Downstream region at tRNA end position 
aaaataaaat
Secondary structure (Cloverleaf model)
>WENV170527162	Val	GAC
                   t      ACCA aaaataaaat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T A
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C A       A C T G G     C
  G         | | | |                 T T
  T         G A G T
    T C A          G     AAGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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