The detailed information of tRNA gene sequence


Sequence ID>WENV170527331
Genome IDCEWI01138725
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 99
End posion on genome 23
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
taactttttt
tRNA gene sequence 
CGGGGCGTGGCGTAGCTTGGTAGCGCACTGGTATGGGGTACCAGAGGTCGTTGGTTCAAA
TCCAATCGCCCCGACCA
Downstream region at tRNA end position 
ctaatttaaa
Secondary structure (Cloverleaf model)
>WENV170527331	Pro	GGG
                   t      ACCA ctaatttaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A A C C     A
      C G A        G      + | | | |     A
    T       T G C G       G T T G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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