The detailed information of tRNA gene sequence


Sequence ID>WENV170527435
Genome IDCEWI01160961
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 166
End posion on genome 77
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccccaaattt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCCGAAAGCAGCCCCCTGCTAAGGGGTTAAGGGTGAGCACCCT
TCGTAGGTTCGAATCCTACTCTCTCCGCCA
Downstream region at tRNA end position 
ttagtaaagc
Secondary structure (Cloverleaf model)
>WENV170527435	Ser	GCT
                   t      GCCA ttagtaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T A G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     TAAGGGTGAGCACCCTTC
                    G + T
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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