The detailed information of tRNA gene sequence


Sequence ID>WENV170527566
Genome IDCEWI01215022
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 578
End posion on genome 653
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaacttagt
tRNA gene sequence 
GGTTCTGTAGTGTAGTGGACCAACATCGGAGGCTTTCGACCTCTGGACACGGGTTCGAAT
CCCGTCGGAACTGCCA
Downstream region at tRNA end position 
agtatatata
Secondary structure (Cloverleaf model)
>WENV170527566	Glu	TTC
                   t      GCCA agtatatata
                     G + T
                     G - C
                     T - A
                     T - A
                     C - G
                     T + G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | | | | |     G
    G       T G T G       A C G G G     C
    G       | | | +                 T T
    A       A C A T
      C C A        C     GGAC
                    G + T
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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