The detailed information of tRNA gene sequence


Sequence ID>WENV170528152
Genome IDCEWJ01021065
Search identical group
Phylum/Class[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1943
End posion on genome 2019
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atatctttca
tRNA gene sequence 
GGGCAAGTAGCTCAACTGGATAGAGCATCGGTCTTCTAAACCGAGGGTTGCGGGTTCAAG
TCCCGCCTTGCCTACCA
Downstream region at tRNA end position 
tcccccactt
Secondary structure (Cloverleaf model)
>WENV170528152	Arg	TCT
                   a      ACCA tcccccactt
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C G C C C     A
      C A A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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