The detailed information of tRNA gene sequence


Sequence ID>WENV170528329
Genome IDCEWJ01035019
Search identical group
Phylum/Class[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 312405
End posion on genome 312318
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgaaggaaca
tRNA gene sequence 
GGAGAGGTGCCCGAGAGGCCGAAGGGAGCAGTTTGCTAAACTGTCGTAGGTGTATGCCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
tggtgtcaca
Secondary structure (Cloverleaf model)
>WENV170528329	Ser	GCT
                   a      GCat tggtgtcaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     CGTAGGTGTATGCCTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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