The detailed information of tRNA gene sequence


Sequence ID>WENV170530077
Genome IDCEWJ01267961
Search identical group
Phylum/Class[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1154
End posion on genome 1081
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccacgatcgt
tRNA gene sequence 
AGAGGATAAGTGTTACGGTAGCACGGGTGGCTCCAACCCACCAAGCCAGGGTTCGACTCC
TTGATCCTCTGCCA
Downstream region at tRNA end position 
acgcgggtat
Secondary structure (Cloverleaf model)
>WENV170530077	Trp	CCA
                   t      GCCA acgcgggtat
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T C
                    A     G T T C C     A
        A T        A      | | + | |     G
      C     T G T G       C A G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        G     AAGC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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