The detailed information of tRNA gene sequence


Sequence ID>WENV170530564
Genome IDCEWK01032378
Search identical group
Phylum/Class[CEWK] marine metagenome genome assembly TARA_132_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3336
End posion on genome 3410
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acatctaata
tRNA gene sequence 
GGACCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCat
Downstream region at tRNA end position 
ataaattccg
Secondary structure (Cloverleaf model)
>WENV170530564	Asp	GTC
                   a      GCat ataaattccg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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