The detailed information of tRNA gene sequence


Sequence ID>WENV170531715
Genome IDCEWK01243013
Search identical group
Phylum/Class[CEWK] marine metagenome genome assembly TARA_132_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 50
End posion on genome 123
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccactttat
tRNA gene sequence 
GGGTGAGTAGTGTAGTGGTAACACGTCAGATTCCAAACCTGAAGACTAGGGTTCGATTCC
TTGCTCGCCTGCCA
Downstream region at tRNA end position 
aaaacacagg
Secondary structure (Cloverleaf model)
>WENV170531715	Trp	CCA
                   t      GCCA aaaacacagg
                     G + T
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     G - C          T T
                    T     G T T C C     A
        G A        A      + | + | |     G
      T     T G T G       T A G G G     C
      G     | | | |                 T T
      G     A C A C
        T A        G     AGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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