The detailed information of tRNA gene sequence


Sequence ID>WENV170533282
Genome IDCEWO01114461
Search identical group
Phylum/Class[CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 212
End posion on genome 296
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaatacaaa
tRNA gene sequence 
GCATCTGTAGCCAAGCGGCCGAAGGCATCGGACTCATAATCCGCTTCTCATAGAGACAAC
GCTGGTTCGAATCCAGTCGGATGCAagt
Downstream region at tRNA end position 
acgtgcgaac
Secondary structure (Cloverleaf model)
>WENV170533282	Met	CAT
                   a      Aagt acgtgcgaac
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    G       A C C G       G C T G G     C
    G         | | |                 T T
    C       A G G C
      C G A        A     TTCTCATAGAGACAAC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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