The detailed information of tRNA gene sequence


Sequence ID>WENV170536606
Genome IDCEWP01236162
Search identical group
Phylum/Class[CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 269
End posion on genome 339
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttgtattta
tRNA gene sequence 
AGGAGTATAGTTTAATGGCAGAACCGTGGTCTTCAAAACCATTAGCGTGGGTTCGATTCC
TGCTACTCTTGata
Downstream region at tRNA end position 
actttagtaa
Secondary structure (Cloverleaf model)
>WENV170536606	SeC	TCA
                   a      Gata actttagtaa
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T T
                    T     C G T C C     A
        A A        A      | + + | |     G
      T     T T T G       G T G G G     C
      G     + | | |                 T T
      G     G A A C
        C A        C     TAGC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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