The detailed information of tRNA gene sequence


Sequence ID>WENV170536694
Genome IDCEWP01276292
Search identical group
Phylum/Class[CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 219
End posion on genome 143
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaccgtataa
tRNA gene sequence 
GGACCTATAGCTCAATTGGTTAGAGTAGTCGTCTCATAAACGATTGGTTCCAGGTTCAAG
TCCTGGTGGGTCTACTA
Downstream region at tRNA end position 
aataaggaga
Secondary structure (Cloverleaf model)
>WENV170536694	Met	CAT
                   a      ACTA aataaggaga
                     G + T
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTT
                    G + T
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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