The detailed information of tRNA gene sequence


Sequence ID>WENV170538042
Genome IDCEWR01047606
Search identical group
Phylum/Class[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1345
End posion on genome 1246
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
accctacgac
tRNA gene sequence 
GGAAGTGCCTGTACGACTGGTGTCGGCCTCGGTCTTCAAAACCGGTGGGCCGCAAGTTAA
CCTTGTGGCCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttttctag
Secondary structure (Cloverleaf model)
>WENV170538042	SeC(p)	TCA
                   c      GCCA ttttttctag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A G        T      + | | | |     G
    T       C A T G       G T G G G     C
    G           + |                 T T
    G       C G G C
      T G T        C     TGGGCCGCAAGTTAACCTTGTGGCCG
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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