The detailed information of tRNA gene sequence


Sequence ID>WENV170538951
Genome IDCEWR01136382
Search identical group
Phylum/Class[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2238
End posion on genome 2328
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttcttaatt
tRNA gene sequence 
GGAGAGATGGCTGAGAGGTTTAAGGCGCTCGCTTGGAAAGCGAGTGTGCGGTAATACCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgaaaccctt
Secondary structure (Cloverleaf model)
>WENV170538951	Ser	GGA
                   t      GCCA tgaaaccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTGCGGTAATACCGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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