The detailed information of tRNA gene sequence


Sequence ID>WENV170539386
Genome IDCEWR01193507
Search identical group
Phylum/Class[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 348
End posion on genome 276
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cactatccca
tRNA gene sequence 
AAAAGTTTAGTTTAATGGTTAAAATATTGAATTTCAAATTCAAGGATTAAAGGTTCGATT
CCTTTAACTTTTGgaa
Downstream region at tRNA end position 
ttcttttatt
Secondary structure (Cloverleaf model)
>WENV170539386	SeC	TCA
                   a      Ggaa ttcttttatt
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A
                     T - A          T T
                    T     T T T C C     A
      T A A        A      | | | | |     G
    G       T T T G       A A A G G     C
    G       | | | +                 T T
    T       A A A T
      T A          A     GGATT
                    T - A
                    T - A
                    G - C
                    A - T
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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