The detailed information of tRNA gene sequence


Sequence ID>WENV170539509
Genome IDCEWR01237966
Search identical group
Phylum/Class[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 562
End posion on genome 653
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaatgtaac
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAACGGTTTGCTAAATCGTCGTACTTAGAAATAGG
TACCCAGGGTTCGAATCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
atttcttttg
Secondary structure (Cloverleaf model)
>WENV170539509	Ser	GCT
                   c      GCAA atttcttttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACTTAGAAATAGGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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