The detailed information of tRNA gene sequence


Sequence ID>WENV170539647
Genome IDCEWR01275428
Search identical group
Phylum/Class[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1
End posion on genome 77
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGGCGTGGCGCAGCCCGGTAGCGCGCCTGCTTTGGGAGCAGGAAGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttcttttct
Secondary structure (Cloverleaf model)
>WENV170539647	Pro	TGG
                   n      ACCA tttcttttct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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