The detailed information of tRNA gene sequence


Sequence ID>WENV170542017
Genome IDCXPW01000006
Search identical group
Phylum/Class[CXPW] human gut metagenome genome assembly hB3, contig hB3_contig002293.; ENVO:feces
Species
Start position on genome 18842
End posion on genome 18754
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgaaagaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACTCCTAAAGGGT
ATCACGAGTTCGAATCTCGTTCTCTCCGCac
Downstream region at tRNA end position 
attgtttgta
Secondary structure (Cloverleaf model)
>WENV170542017	Ser	GGA
                   a      GCac attgtttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACTCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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