The detailed information of tRNA gene sequence


Sequence ID>WENV170542823
Genome IDCXQJ01000036
Search identical group
Phylum/Class[CXQJ] human gut metagenome genome assembly hC4, contig hC4_contig001608.; ENVO:feces
Species
Start position on genome 23476
End posion on genome 23388
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcaccaatt
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGCCAAAAGTGT
ATCGCGGGTTCGAATCCCGCTCTCTCCGCag
Downstream region at tRNA end position 
gaaatattaa
Secondary structure (Cloverleaf model)
>WENV170542823	Ser	GGA
                   t      GCag gaaatattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGCCAAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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