The detailed information of tRNA gene sequence


Sequence ID>WENV170546780
Genome IDCXTA01000003
Search identical group
Phylum/Class[CXTA] Human gut metagenome genome assembly, contig: mD10_contig000148.; ENVO:feces
Species
Start position on genome 864
End posion on genome 775
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgtaacgt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAACGGC
TCGAGGGTTCGAATCCCTCTGACTCCGCAA
Downstream region at tRNA end position 
gcacgggctt
Secondary structure (Cloverleaf model)
>WENV170546780	Ser	GCT
                   t      GCAA gcacgggctt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTAAACGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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