The detailed information of tRNA gene sequence


Sequence ID>WENV170548322
Genome IDCXUD01001350
Search identical group
Phylum/Class[CXUD] Human gut metagenome genome assembly, contig: mA2_contig002203.; ENVO:feces
Species
Start position on genome 192
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataactggt
tRNA gene sequence 
GGGGAGTTACTCAAGAGGCTGAAGAGGACGGTTTGCTAAATCGTTAGGTCGGGAAACCGG
CGCGAGGGTTCGAATCCCTTACTCCCCTtcc
Downstream region at tRNA end position 
gtacaacgac
Secondary structure (Cloverleaf model)
>WENV170548322	Ser	GCT
                   t      Ttcc gtacaacgac
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      A G A        A      + | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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