The detailed information of tRNA gene sequence


Sequence ID>WENV170549788
Genome IDCXVI01000894
Search identical group
Phylum/Class[CXVI] Human gut metagenome genome assembly, contig: mF4_contig002506.; ENVO:feces
Species
Start position on genome 839
End posion on genome 753
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accagcttat
tRNA gene sequence 
GGAGAGTTGACAGAGCGGTTTATTGTGATCGGTTGCTAACTGATTGTAGCTTAATAGCTA
CCAAGAGTTCGAATCTCTTACTCTCCTttt
Downstream region at tRNA end position 
gtgcatctcg
Secondary structure (Cloverleaf model)
>WENV170549788	Ser	GCT
                   t      Tttt gtgcatctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C T C     A
      C G A        G      | | | | |     G
    G       G A C A       A A G A G     C
    G       + | | |                 T T
    T       T T G T
      T T A        G     TGTAGCTTAATAGCTACC
                    A - T
                    T - A
                    C - G
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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