The detailed information of tRNA gene sequence


Sequence ID>WENV170550281
Genome IDCXVT01001309
Search identical group
Phylum/Class[CXVT] Human gut metagenome genome assembly, contig: mG12_contig003027.; ENVO:feces
Species
Start position on genome 367
End posion on genome 460
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtttttatta
tRNA gene sequence 
GGGGAGTGGATGGGTTCTGGTGTTCCCTCTGGTCTTCAAAACCAGTATGAGGAGTTAAGA
GCTTCTTGGGTAGGTTCGATTCCTACACATTCCCgcc
Downstream region at tRNA end position 
aattgaatac
Secondary structure (Cloverleaf model)
>WENV170550281	SeC(p)	TCA
                   a      Cgcc aattgaatac
                     G - C
                     G - C
                     G + T
                     G + T
                     A   A
                     G - C
                     T - A          T T
                    G     C A T C C     A
    C T T G        G      | | | | |     G
  T         G G T A       G T A G G     C
  G         + |                     T T
  G         T C C C
    T G T          T     TATGAGGAGTTAAGAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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