The detailed information of tRNA gene sequence


Sequence ID>WENV170551145
Genome IDCXWJ01000494
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 17976
End posion on genome 18064
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgaaccaat
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCTAGTGCGCACGCTTGGAAAGCGTGTAACCCAAAAGGTT
CGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaaatactc
Secondary structure (Cloverleaf model)
>WENV170551145	Ser	GGA
                   t      GCCA aaaaatactc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TAACCCAAAAGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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