The detailed information of tRNA gene sequence


Sequence ID>WENV170551312
Genome IDCXWJ01003861
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 3912
End posion on genome 3825
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcctggtcac
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCCGAATCGGACGGTCTCGAAAACCGTTGTCCTGAAAGGGACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cacctgcggc
Secondary structure (Cloverleaf model)
>WENV170551312	Ser	CGA
                   c      GCCA cacctgcggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGTCCTGAAAGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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