The detailed information of tRNA gene sequence


Sequence ID>WENV170551409
Genome IDCXWJ01006869
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 917
End posion on genome 1007
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcggcttcc
tRNA gene sequence 
GGAGGGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTAGGGTAATCCCCT
ACCGCGGGTTCGAATCCCGCCTCCTCCGCCA
Downstream region at tRNA end position 
gaacacacca
Secondary structure (Cloverleaf model)
>WENV170551409	Ser	GGA
                   c      GCCA gaacacacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTAGGGTAATCCCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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