The detailed information of tRNA gene sequence


Sequence ID>WENV170551706
Genome IDCXWJ01018383
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 5844
End posion on genome 5748
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taatcgactt
tRNA gene sequence 
GGAGGTGCGTGCTTGCCTGGTGGCGGCCACGGTCTTCAAAACCGTTGGAACGAACGTTAA
GCGTTGGTTCGGTGGGTTCGATTCCCATGCATCTCCGttc
Downstream region at tRNA end position 
gctataagga
Secondary structure (Cloverleaf model)
>WENV170551706	SeC(p)	TCA
                   t      Gttc gctataagga
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C C G        T      + | | | |     G
    T       T T C G       G T G G G     C
    G         + | |                 T T
    G       C G G C
      T G G        C     TGGAACGAACGTTAAGCGTTGGTTCG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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