The detailed information of tRNA gene sequence


Sequence ID>WENV170552047
Genome IDCXWJ01035993
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 1545
End posion on genome 1460
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaattcgtcg
tRNA gene sequence 
GGAGGGTTGTCCGAGCGGCCGATGGACCTGGTCTTGAAAACCAGTGGGCAGCAATGTCCC
GTGGGTTCGAATCCCACACCCTCCGCtt
Downstream region at tRNA end position 
cgtcgtgggt
Secondary structure (Cloverleaf model)
>WENV170552047	Ser	TGA
                   g      GCtt cgtcgtgggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    C       T G G A
      C G A        C     TGGGCAGCAATGTCCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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