The detailed information of tRNA gene sequence


Sequence ID>WENV170552132
Genome IDCXWJ01040996
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 1421
End posion on genome 1495
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caacaagcat
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAG
TCCCGTCAGGGTCGCtc
Downstream region at tRNA end position 
cgagcgacaa
Secondary structure (Cloverleaf model)
>WENV170552132	Asp	GTC
                   t      GCtc cgagcgacaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C G G G     C
    G       | | | +                 T T
    G       G C G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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