The detailed information of tRNA gene sequence


Sequence ID>WENV170552388
Genome IDCXWJ01061389
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 916
End posion on genome 1010
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gggtctgggc
tRNA gene sequence 
GGAGGCGTCTGCGTCCTGGTGGGCGTCCCGGTCTTCAAAACCGGTGAGGCCGAGGATCTC
GGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
cagcggcgat
Secondary structure (Cloverleaf model)
>WENV170552388	SeC(p)	TCA
                   c      GCCA cagcggcgat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      T C C        T      + | | | |     G
    G       T G C G       G C G G G     C
    G       + | | +                 T T
    T       G C G T
      G G          C     TGAGGCCGAGGATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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