The detailed information of tRNA gene sequence


Sequence ID>WENV170552840
Genome IDCXWK01002594
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1261
End posion on genome 1172
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacgcgcgcc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTGCTAAATGAGCAAGCCCGAAAGGGCT
TCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ttcccgccag
Secondary structure (Cloverleaf model)
>WENV170552840	Ser	GCT
                   c      GCCA ttcccgccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CAAGCCCGAAAGGGCTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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