The detailed information of tRNA gene sequence


Sequence ID>WENV170552954
Genome IDCXWK01004480
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1296
End posion on genome 1383
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgcagtctt
tRNA gene sequence 
GGAGGGCTCGCATAGTGGCCTAGTGCGGCGGTCTTGAAAACCGCTATGGCGGCAACGTCA
TCGTGGGTTCGAATCCCACGCCCTCCGCgc
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170552954	Ser	TGA
                   t      GCgc nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATGGCGGCAACGTCATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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