The detailed information of tRNA gene sequence


Sequence ID>WENV170553041
Genome IDCXWK01006091
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1004
End posion on genome 913
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctccgcacca
tRNA gene sequence 
GGAGGCGTGCCAGAGCGGCCGAATGGGACTCACTGCTAATGAGTTGTCCGGCTTAACCCG
GACCGGAGGTTCAAATCCTCTCGCCTCCGCCA
Downstream region at tRNA end position 
ctgcacttcg
Secondary structure (Cloverleaf model)
>WENV170553041	Ser	GCT
                   a      GCCA ctgcacttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    G       G A C C       G G A G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCCGGCTTAACCCGGACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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