The detailed information of tRNA gene sequence


Sequence ID>WENV170553183
Genome IDCXWK01010295
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 420
End posion on genome 517
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aattgaatgt
tRNA gene sequence 
GGGAGTGGTTGTGTCCCGGTGGATGCTGCGGTCTTCAAAACCGTTGGCCGGTCGCGCACA
GCGAGCGGCGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
ctcgcctaaa
Secondary structure (Cloverleaf model)
>WENV170553183	SeC(p)	TCA
                   t      GCCt ctcgcctaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G T G       G T G G G     C
    G       | + + |                 T T
    T       A T G C
      G G          T     TGGCCGGTCGCGCACAGCGAGCGGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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