The detailed information of tRNA gene sequence


Sequence ID>WENV170553363
Genome IDCXWK01016043
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 177
End posion on genome 274
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aattgaacgt
tRNA gene sequence 
GGGAGTGGTTGTGTCCCGGTGGATGCCGCGGTCTTCAAAACCGTTGGCCGGTCGCGCACA
GCGAGCGGCGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
gattctgatc
Secondary structure (Cloverleaf model)
>WENV170553363	SeC(p)	TCA
                   t      GCCt gattctgatc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G T G       G T G G G     C
    G       | + + |                 T T
    T       A T G C
      G G          C     TGGCCGGTCGCGCACAGCGAGCGGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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