The detailed information of tRNA gene sequence


Sequence ID>WENV170553371
Genome IDCXWK01016120
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 424
End posion on genome 337
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caactgattc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCGAAAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
atagtgaagg
Secondary structure (Cloverleaf model)
>WENV170553371	Ser	CGA
                   c      GCtg atagtgaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGCCGAAAGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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