The detailed information of tRNA gene sequence


Sequence ID>WENV170553429
Genome IDCXWK01018027
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1166
End posion on genome 1076
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctggtatccC
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGAATGCGCCGGTTTGCTAAATCGGTGTAGGGTTAATACCC
TACCGCGGGTTCGAATCCCGCCCTCTCCGTta
Downstream region at tRNA end position 
ttcgtcggtg
Secondary structure (Cloverleaf model)
>WENV170553429	Ser	GCT
                   C      GTta ttcgtcggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     TGTAGGGTTAATACCCTACC
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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