The detailed information of tRNA gene sequence


Sequence ID>WENV170554358
Genome IDCXWK01063736
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 258
End posion on genome 348
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgcacgtgt
tRNA gene sequence 
GGAGAGGTCGCCTAGTCCGGTTTATGGCGCGGGCCTGGAAAGCTCGTAACCCCATAAAGG
TTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
caagcaaaat
Secondary structure (Cloverleaf model)
>WENV170554358	Ser	GGA
                   t      GCCA caagcaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T C C G       G A G G G     C
  G           | | |                 T T
  G         T G G C
    T T T A        G     TAACCCCATAAAGGTTC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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