The detailed information of tRNA gene sequence


Sequence ID>WENV170554467
Genome IDCXWK01071528
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1902
End posion on genome 1813
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttggcctaa
tRNA gene sequence 
GGAAGAGTGGCTGAGTGGTTGAAGGCACCGGTTTCGAAAACCGGCAGGCTCGTAAGGGTC
TCGAGAGTTCAAATCTCTCCTCTTCCGCCC
Downstream region at tRNA end position 
ataaaataat
Secondary structure (Cloverleaf model)
>WENV170554467	Ser	CGA
                   a      GCCC ataaaataat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     A
    G       G T C G       G A G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        A     CAGGCTCGTAAGGGTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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